MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Mammaliicoccus lentus
3_3BalbC2O2_S3
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 274
bases: 2,889,488 bps
CDS: 2,757
rRNA: 6
Repeat region:
tmRNA: 1
tRNA: 55
misc RNA:
Total features: 2,819
Total number of protein coding genes annotated/found:
2,757
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Items 21 - 40
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5053|JADGLT010000087.1
SEQF5053_00388
Genome Viewer
NA
AA
321/107
2155-1835
Nucleoid-associated protein
SEQF5053|JADGLT010000134.1
SEQF5053_01122
Genome Viewer
NA
AA
393/131
2255-1863
Glycerol-3-phosphate cytidylyltransferase
SEQF5053|JADGLT010000025.1
SEQF5053_00006
Genome Viewer
NA
AA
954/318
2399-1446
Glyoxylate/hydroxypyruvate reductase B
SEQF5053|JADGLT010000134.1
SEQF5053_01123
Genome Viewer
NA
AA
1344/448
2550-3893
hypothetical protein
SEQF5053|JADGLT010000161.1
SEQF5053_01136
Genome Viewer
NA
AA
1488/496
2699-1212
Lysine--tRNA ligase
SEQF5053|JADGLT010000254.1
SEQF5053_02519
Genome Viewer
NA
AA
936/312
2699-3634
CdaA regulatory protein CdaR
SEQF5053|JADGLT010000025.1
SEQF5053_00007
Genome Viewer
NA
AA
462/154
2866-2405
Putative peroxiredoxin
SEQF5053|JADGLT010000161.1
SEQF5053_01137
Genome Viewer
NA
AA
150/50
2866-2717
hypothetical protein
SEQF5053|JADGLT010000025.1
SEQF5053_00008
Genome Viewer
NA
AA
1287/429
2948-4234
Glutamate-1-semialdehyde 2%2C1-aminomutase 2
SEQF5053|JADGLT010000111.1
SEQF5053_01001
Genome Viewer
NA
AA
1620/540
3056-1437
Oligopeptide-binding protein OppA
SEQF5053|JADGLT010000232.1
SEQF5053_01982
Genome Viewer
NA
AA
588/196
3311-3898
hypothetical protein
SEQF5053|JADGLT010000161.1
SEQF5053_01138
Genome Viewer
NA
AA
489/163
3374-2886
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
SEQF5053|JADGLT010000111.1
SEQF5053_01002
Genome Viewer
NA
AA
717/239
3461-4177
HTH-type transcriptional repressor NagR
SEQF5053|JADGLT010000062.1
SEQF5053_00147
Genome Viewer
NA
AA
1392/464
3547-2156
HTH-type transcriptional regulatory protein GabR
SEQF5053|JADGLT010000254.1
SEQF5053_02520
Genome Viewer
NA
AA
1377/459
3634-5010
Phosphoglucosamine mutase
SEQF5053|JADGLT010000062.1
SEQF5053_00148
Genome Viewer
NA
AA
888/296
3655-4542
Pyridoxal 5'-phosphate synthase subunit PdxS
SEQF5053|JADGLT010000161.1
SEQF5053_01139
Genome Viewer
NA
AA
360/120
3734-3375
Dihydroneopterin aldolase
SEQF5053|JADGLT010000134.1
SEQF5053_01124
Genome Viewer
NA
AA
1110/370
3890-4999
hypothetical protein
SEQF5053|JADGLT010000087.1
SEQF5053_00389
Genome Viewer
NA
AA
1692/564
3938-2247
Holliday junction ATP-dependent DNA helicase RuvB
SEQF5053|JADGLT010000232.1
SEQF5053_01983
Genome Viewer
NA
AA
354/118
3968-4321
hypothetical protein
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Items 21 - 40
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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